#
# This protocol just loads lots of different features and TRANSFAC motifs and creates a few variables just for show
#

DNA = new DNA sequence dataset(DataTrack:DNA)
EnsemblGenes = new Region dataset(DataTrack:EnsemblGenes)
CCDS = new Region dataset(DataTrack:CCDS)
Multiz28wayCons = new Numeric dataset(DataTrack:Multiz28wayCons)
RepeatMasker = new Region dataset(DataTrack:RepeatMasker)
RegulatoryPotential7X = new Numeric dataset(DataTrack:RegulatoryPotential7X)
CpG_islands = new Region dataset(DataTrack:CpG-islands)
GBP = new Numeric dataset(DataTrack:GBP)
TFBSConsSites = new Region dataset(DataTrack:TFBSConsSites)
Nucleosomes_Dennis = new Numeric dataset(DataTrack:Nucleosomes_Dennis)

TRANSFAC_Public = new Motif Collection(Collection:TRANSFAC Public)

EPD_human_3 = new Background Model(Model:EPD_human_3)
NumericVariable1 = new Numeric Variable(3.0)
StringCollection1 = new String Collection("CACGTG","CACn{2,5}GTG","TATAA")